98-24357. Endangered and Threatened Species; Threatened Status for Johnson's Seagrass  

  • [Federal Register Volume 63, Number 177 (Monday, September 14, 1998)]
    [Rules and Regulations]
    [Pages 49035-49041]
    From the Federal Register Online via the Government Publishing Office [www.gpo.gov]
    [FR Doc No: 98-24357]
    
    
    =======================================================================
    -----------------------------------------------------------------------
    
    DEPARTMENT OF COMMERCE
    
    National Oceanic and Atmospheric Administration
    
    50 CFR Part 227
    
    [Docket No. 980811214-8214-01; I.D. 052493B]
    
    
    Endangered and Threatened Species; Threatened Status for 
    Johnson's Seagrass
    
    AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and 
    Atmospheric Administration (NOAA), Commerce.
    
    ACTION: Final rule.
    
    -----------------------------------------------------------------------
    
    SUMMARY: NMFS is issuing a final rule determining Johnson's seagrass 
    (Halophila johnsonii) to be a threatened species pursuant to the 
    Endangered Species Act (ESA) of 1973, as amended, which means it is 
    likely to become an endangered species within the foreseeable future 
    throughout all or a significant portion of its range. Johnson's 
    seagrass is rare and exhibits one of the most limited geographic 
    distributions of any seagrass. Within its limited range (lagoons on the 
    east coast of Florida from Sebastian Inlet to central Biscayne Bay), it 
    is one of the least abundant species. Because of its limited 
    reproductive capacity (apparently only asexual) and limited energy 
    storage capacity (small root-rhizome structure and high biomass 
    turnover), it is less likely to be able to repopulate an area when lost 
    due to anthropogenic or natural disturbances. NMFS will soon issue 
    protective regulations under section 4(d) of the ESA for this species.
    
    DATES: Effective October 14, 1998.
    
    ADDRESSES: Colleen Coogan, NMFS, Southeast Region, Protected Resources 
    Division, 9721 Executive Center Drive, St. Petersburg, FL 33702-2432; 
    Angela Somma, NMFS, Office of Protected Resources, 1315 East-West 
    Highway, Silver Spring, MD 20910.
    
    FOR FURTHER INFORMATION CONTACT: Colleen Coogan, Southeast Region, 
    NMFS, (727) 570-5312, or Angela Somma, Office of Protected Resources, 
    NMFS, (301) 713-1401.
    
    SUPPLEMENTARY INFORMATION:
    
    Background
    
        NMFS published a proposed rule to list Johnson's seagrass as a 
    threatened species on September 15, 1993 (58 FR 48326). Designation of 
    critical habitat was proposed on August 4, 1994 (59 FR 39716). A public 
    hearing on both the proposed listing and critical habitat designation 
    was held in Vero Beach, Florida, on September 20, 1994. NMFS reopened 
    the comment period for the proposed listing on April 20, 1998 (63 FR 
    19468).
        The information forming the basis for NMFS' 1993 proposal has been 
    peer reviewed, and new information confirms NMFS' conclusions regarding 
    the threatened status of Johnson's seagrass. As stated in the notice 
    reopening the comment period, the additional information supplements 
    available data on the status and distribution of Johnson's seagrass. In 
    order to update the original status report (Kenworthy, 1993) and to 
    include information from new field and laboratory research on species 
    distribution, ecology, genetics and phylogeny, NMFS convened a workshop 
    on the biology, distribution, and abundance of H. johnsonii. The 
    results of this workshop, held in St. Petersburg, Florida, in November 
    1996, were summarized in the workshop proceedings (Kenworthy, 1997) 
    submitted to NMFS on October 15, 1997. The notice reopening the comment 
    period contains a summary of the workshop proceedings (63 FR 19468). 
    This final rule contains a brief description of those workshop 
    proceedings, and updates the research findings and analysis since NMFS' 
    1993 proposal.
    
    Updated Status Report
    
        The biology of Johnson's seagrass is discussed in the proposed rule 
    to list the species as threatened (58 FR 48326, September 15, 1993). 
    The proposed rule includes information on the status of the species, 
    its life history characteristics, and habitat requirements. Johnson's 
    seagrass is one of twelve species of the genus Halophila. Halophila 
    species are distinguished morphologically from other seagrasses in 
    their possession of either a pair of stalked leaves without scales or a 
    pseudo whorl of leaves. Identifying characteristics of H. johnsonii 
    include smooth foliage leaves in pairs 10-20 mm long, a creeping 
    rhizome stem, sessile (attached to their bases) flowers, and longnecked 
    fruits. Most Halophila species are reduced in size, more shallow 
    rooted, and have two to three orders of magnitude less biomass per unit 
    area compared to all other seagrasses. The most outstanding difference 
    between H. johnsonii and other species is its distinct differences in 
    sexual reproductive characteristics. While H. decipiens is monoecious 
    (has both female and male flowers on the same plant) and successfully 
    reproduces and propagates by seed, H. johnsonii is dioecious (has 
    flowers of a single sex on the same plant). However, the male flower 
    has never been described either in the field or in laboratory culture. 
    The absence of male flowers supports the hypothesis that sexual 
    reproduction is absent in this species, and propagation must be 
    exclusively vegetative. After periods of unfavorable environmental 
    conditions of growth and vegetative branching, the regrowth and 
    reestablishment of surviving populations of Johnson's seagrass would be 
    significantly more difficult than for species with a sexual life 
    history.
    
    [[Page 49036]]
    
        The status review that led to the proposed rule to list this 
    species as threatened under the ESA included data from extensive field 
    work at three sites (Hobe and Jupiter sounds, Sebastian Inlet, and Ft. 
    Pierce Inlet) in the Indian River area during 1990 to 1992. Johnson's 
    seagrass was the least abundant of the seagrass species within the 
    study area and was distributed in patches that range in size from a few 
    centimeters to hundreds of meters. Biomass, patch sizes, and leaf pair 
    densities were always less than those measured in H. decipiens. The 
    destruction of the benthic community due to boating activities, 
    propeller dredging and anchor mooring was observed at all sites during 
    this study.
        Based on new qualitative and quantitative benthic surveys and 
    interviews with scientists, the workshop report confirmed the extremely 
    limited geographic distribution of H. johnsonii to patchy and 
    vertically disjunct populations between Sebastian Inlet and northern 
    Biscayne Bay on the east coast of Florida, finding no verifiable 
    sightings outside the range already reported. Since additional surveys 
    did not locate any male flowers, nor was seedling recruitment 
    confirmed, the restricted distribution and abundance of Johnson's 
    seagrass is attributed to a reliance on vegetative means of 
    reproduction and growth (Kenworthy, 1993; Kenworthy, 1997). High 
    densities of apical meristems, rapid rates of horizontal growth, and a 
    fast biomass turnover were suggested to explain the appearance and 
    disappearance of H. johnsonii observed in disturbed areas and on fixed 
    survey transects. The workshop report confirms the conclusions from the 
    previous data.
        The results of expanded surveys during the period 1994 to 1996 
    corroborated previous information that: (1) H. johnsonii does not occur 
    further north than Sebastian Inlet; and (2) areal distribution is 
    patchy and disjunct from Sebastian Inlet to Jupiter Inlet. 
    Additionally, these transects confirmed that H. johnsonii occurs over a 
    depth range extending from the intertidal down to approximately -2 m 
    mean tidal height. Average percent cover of H. johnsonii per transect 
    ranged from a minimum of 0.2 percent in winter 1996 to 8.5 percent in 
    summer 1994. Relative to the other six species that occur in the 
    lagoon, H. johnsonii comprises less than 1.0 percent of the total 
    abundance of seagrasses. The transect data corroborates previous 
    intensive surveys in Jupiter and Hobe sounds, and near Fort Pierce 
    Inlet (Kenworthy, 1993; Gallegos and Kenworthy, 1995; Kenworthy, 1997).
        The potential for vegetative expansion, a perennial and intertidal 
    growth habit, and a relatively high tolerance for fluctuating salinity 
    and temperature may enable Johnson's seagrass to colonize and thrive in 
    environments where other seagrasses cannot survive (Kenworthy, 1993; 
    Kenworthy, 1997). Additional molecular genetic information was reviewed 
    in the workshop which supports distinguishing H. johnsonii as a 
    separate species from H. decipiens (Kenworthy, 1993), although more 
    detailed and extensive phylogenetic studies were suggested to determine 
    the origin and source of genetic diversity in Johnson's seagrass 
    (Kenworthy, 1997). The first quantitative evidence of faunal community 
    diversity and abundance in H. johnsonii meadows was also reported at 
    this workshop. Results indicated that the infaunal communities of H. 
    johnsonii are more similar to the larger seagrass, Halodule wrightii 
    than to unvegetated bottom.
        It is the policy of NMFS and the U.S. Fish and Wildlife Service 
    (FWS) to solicit the expert opinions of three appropriate and 
    independent specialists regarding pertinent scientific or commercial 
    data and assumptions relating to the taxonomy, population models, and 
    supportive biological and ecological information for species under 
    consideration for listing. Also, it is NMFS' policy to summarize in the 
    final decision document the opinions of all independent peer reviews 
    received and to include all such reports, opinions, and other data in 
    the administrative record of the final decision.
        In response to NMFS's three solicitations of peer review on 
    Johnson's seagrass, a response was received from Susan Williams, Ph.D., 
    Associate Professor, Department of Biology and Director, Coastal and 
    Marine Institute, College of Sciences, San Diego State University and 
    from Kimon T. Bird, Ph.D., Center for Marine Science Research, 
    University of North Carolina at Wilmington. Their opinions, which 
    support the NMFS listing proposal, are included in the following 
    Summary of Comments section.
    
    Summary of Comments
    
        The State of Florida's Department of Environmental Protection 
    (FDEP) and Department of Community Affairs (DCA) submitted several sets 
    of comments. Many of these comments pertained to the consideration of 
    critical habitat designation, which is not being determined in this 
    rulemaking. For this present rule, NMFS will address only the comments 
    related to the listing of Johnson's seagrass as threatened.
        The December 8, 1993, comments from FDEP concurred that threatened 
    status under the ESA should be assigned to Johnson's seagrass because 
    its distribution is among the most restricted of seagrass species, 
    because it lacks sexual reproduction, and because it depends on 
    vegetative reproduction. All of these factors make it particularly 
    vulnerable to local extinction from various perturbations or 
    environmental changes.
        FDEP stated that johnsonii and other Halophila species have been 
    shown to have relatively high productivity and turnover rates and may 
    be more ecologically important than previously thought. Designation as 
    a threatened species would encourage further study of Johnson's 
    seagrass and would assist FDEP in developing conservation plans. Also, 
    FDEP agreed with NMFS that existing protection for this species was 
    inadequate.
        FDEP included the following caveats: First, the presently known 
    geographical locations include several inlets that have regularly 
    experienced maintenance dredging (one since 1948). Yet Johnson's 
    seagrass is still evident around these inlets and in other areas of 
    high human use. It could be argued that maintenance dredging has 
    enhanced this species, or at least not harmed it. Second, the proposed 
    rulemaking states that there is no evidence that commercial, 
    recreational, scientific or educational activities have contributed to 
    the decline of this species. If this species is listed, what more needs 
    to be done to protect it? Third, identification of this species is 
    difficult except by seagrass experts. Those individuals surveying sites 
    need to understand how to clearly identify H. johnsonii in the field.
        In March 1994, NMFS received additional comments from FDEP 
    concerning the listing proposal, stating that Johnson's seagrass has 
    only recently been recognized as a separate species and that FDEP is 
    seriously concerned with the general lack of knowledge about the 
    organism, especially the many aspects of basic life history. FDEP 
    assumed that the listing of this species as threatened under the ESA 
    should promote the collection of additional knowledge for improved 
    management decisions, including the ability to properly identify the 
    plant in the field. Other Halophila species have been underestimated 
    regarding their importance to nearshore ecosystems, and the FDEP did 
    not want this species to be overlooked if it had a significant role. 
    FDEP recommended that NMFS consider conducting an appropriate research 
    program linked to the listing process and that more must be known
    
    [[Page 49037]]
    
    about the species so that the most appropriate management strategies 
    can be developed. FDEP restated the caveats made in the December 1993, 
    response.
        In September 1994, FDEP commented that the steps being taken by 
    NMFS are necessary to adequately protect this species from loss 
    associated with human-related activities. Although FDEP had 
    reservations as to the effects of inlet-related maintenance activities 
    on the continued existence of Johnson's seagrass, it noted that it is 
    clear that direct removal of existing seagrass will be detrimental to 
    the survival of this species. It supported listing the species as a 
    threatened species.
        In January 1994 and June 1994, DCA responded to NMFS' request for a 
    coastal zone consistency determination for the designation of critical 
    habitat for Johnson's seagrass. Although DCA referred to both the 
    proposed listing and critical habitat designation in responses to NMFS, 
    the comments from individual state agencies and departments addressed 
    primarily the critical habitat portion.
        In 1998, DCA wrote, on behalf of the state, that it does not object 
    to the listing of Johnson's seagrass as a threatened species.
    
    Other Comments
    
        Issue 1: Several commenters questioned whether NMFS has adequate 
    information to determine that Johnson's seagrass should be listed. 
    Others questioned whether it is a separate species rather than a 
    possible mutation or an exotic species not native to the area. Some 
    questioned whether NMFS could list a species without knowing how it 
    reproduces.
        One of the peer reviewers, Dr. Susan L. Williams, stated that while 
    there are data gaps for the species and such data should be obtained, 
    it is justifiable to extrapolate from other species in the genus 
    because seagrass congeners are remarkably alike in their ecology. While 
    it is important to clarify the taxonomic status of the species, it is 
    not an issue that needs to be resolved before listing because the 
    morphology of H. johnsonii is distinct enough from H. decipiens to 
    enable field identification and thus its distribution across habitats.
        In response to questions on whether H. johnsonii is a separate 
    species, another peer reviewer, Dr. Kimon T. Bird, stated that the 
    morphological and flowering characteristics of this species are 
    markedly different from the conspecific species H. engelmanii and H. 
    decipiens. Recently, H. johnsonii was compared to other Halophila 
    species from Florida and the Indo-Pacific using isozymes sulfated 
    flavonoids and DNA fingerprinting (Jewett-Smith et al. 1997). Based on 
    these analyses, H. johnsonii separates out well from other Halophila 
    species in Florida and appears more similar to the narrow leaved forms 
    of the Indo-Pacific based on the use of this DNA analysis.
        Regarding the mode of reproduction, Dr. Bird stated that the data 
    provided support the absence of seeds, and he agrees that this species 
    reproduces only by asexual methods. Dr. Williams states that there is 
    concern about the lack of evidence of sexual reproduction since male 
    flowers have not been observed in H. johnsonii. Furthermore, the sexual 
    reproduction by seagrasses is poorly understood compared to other 
    angiosperms (e.g. seaweeds), and there have been cases where further 
    studies have revised conclusions on asexuality. Apomixis (vegetative 
    reproduction where normal sexual processes are not functioning or 
    greatly reduced in number) has not been verified in seagrasses.
        Nonetheless, considerable field surveys and collections have been 
    conducted on H. johnsonii to conclude that if males and/or viable seeds 
    do occur, they are quite rare in the areas studied. Thus, the 
    attributes of potentially limited distribution, rare (if present at 
    all) sexual reproduction, and uncertain vegetative dispersal makes the 
    species prone to disturbance. Dr. Williams also concludes that limited 
    and isolated populations of H. johnsonii that rely primarily on 
    vegetative dispersal are probably very prone to local extinction due to 
    disturbances and stochastic events. The numerous field searches and 
    laboratory transplant culture experiments have indicated the presence 
    of pistillate flowers (no staminate flowers (i.e., only asexual 
    reproduction) over the 16 years since H. johnsonii was first described.
         NMFS Response: The 1996 NMFS sponsored workshop addressed several 
    of these concerns. For example, since additional surveys have not 
    located any male flowers, nor has seedling recruitment been confirmed, 
    the workshop report attributed the distribution and abundance of 
    Johnson's seagrass to a reliance on vegetative means of reproduction 
    and growth. High densities of apical meristems, rapid rates of 
    horizontal growth, and a fast leaf turnover were suggested to explain 
    the appearance and disappearance of H. johnsonii observed in disturbed 
    areas and on survey transects. The workshop report suggests that this 
    potential for vegetative expansion, a perennial and intertidal growth 
    habit, and a relatively high tolerance for fluctuating salinity and 
    temperature may enable Johnson's seagrass to colonize and thrive in 
    environments where other seagrasses cannot survive.
        Additional molecular genetic information was reviewed in the 
    workshop which supports distinguishing H. johnsonii as a separate 
    species from H. decipiens, although more detailed and extensive 
    phylogenetic studies were suggested to determine the origin and source 
    of genetic diversity in Johnson's seagrass.
        Issue 2: Some commenters believe the species is much more abundant 
    in South Florida than the status review indicates and that it occurs in 
    places other than the east coast of Florida (e.g., Bahamas or Florida 
    west coast).
        Dr. Bird states that he contacted three trained marine botanists 
    along the west coast of Florida. They reported that they had never seen 
    H. johnsonii along the west coast. In addition, McMillan made no 
    reference to its presence in Texas when writing the paper describing 
    the new species, even though he is far more familiar with the marine 
    botany of Texas than Florida. While several commenters reported seeing 
    it in the Bahamas, their observations were anecdotal. Based on the 
    information provided, Dr. Bird concurs that H. johnsonii is limited to 
    a narrow geographic range along the east coast of Florida.
        Dr. Williams states that knowledge of the distribution of H. 
    johnsonii throughout the subtropical and tropical Atlantic should be 
    extended, but it should not affect listing the species because in its 
    known distribution, it is vulnerable to disturbances of dredging and 
    reduced water clarity, as are all the co-occurring seagrass species.
         NMFS Response: In 1986, Robert Virnstein (St. John's River Water 
    Management District) and Kalani Cairns (U.S. Fish and Wildlife Service) 
    mapped a 50-mile section of the Indian River Lagoon from St. Lucie 
    Inlet to Sebastian Inlet. Even though H. johnsonii and H. decipiens 
    seemed to be proliferating, data did not indicate whether this was a 
    trend or a one-time increase. Also, because both species have short 
    leaves, they may have been overlooked in previous surveys. They stated 
    that 1986 was considered a ``good'' year for seagrasses even though 
    many areas were ``stressed'' and had lost seagrasses. Furthermore, they 
    opined that one ``bad'' year could result in the loss of up to half of 
    the present coverage and no one could predict whether such loss would 
    be permanent or that the species would recover.
        Virnstein and Morris (1996-personal communication) have said that 
    their 3-year study of 74 seagrass transects in the
    
    [[Page 49038]]
    
    Indian River Lagoon has yielded information on deeper water 
    distributions measuring a few centimeters to more than several hundred 
    meters. These results do not change the distributional limits within 
    the original range of the species.
        The report of the NMFS workshop confirms the extremely limited 
    geographic distribution of H. johnsonii to patchy and vertically 
    disjunct areas between Sebastian Inlet and northern Biscayne Bay on the 
    east coast of Florida, finding no verifiable sightings outside of the 
    range already reported. This finding is based on new qualitative and 
    quantitative benthic surveys and interviews with scientists.
        Issue 3: Some commenters remarked that it is difficult to identify 
    Johnson's seagrass in the field and that those reviewing sites need to 
    understand how to clearly identify the species.
        NMFS Response: Distinct morphological differences allow for both 
    field and laboratory differentiation of the species. H. johnsonii is 
    distinct from the conspecific H. decipiens in basic leaf 
    characteristics. H. johnsonii has elongated linear leaves with complete 
    margins and H. decipiens has broad, elliptical (paddle-shaped) leaves 
    with serrated margins. Increased outreach after listing, including 
    recovery planning and section 7 consultations, will improve 
    stakeholders' familiarity with these differences.
        Issue 4: Some commenters questioned the presence of Johnson's 
    seagrass near inlets that have been routinely dredged for years and in 
    other areas of high human usage. The question is whether certain 
    dredging, especially maintenance dredging, impacts Johnson's seagrass, 
    or whether the species occurs in these areas as a result of dredging.
        NMFS Response: The effects of maintenance dredging on Johnson's 
    seagrass have not yet been characterized. Johnson's seagrass requires 
    suitable salinity levels, water transparency, and water quality as well 
    as stable, unconsolidated sediments. These elements are found in 
    shallow waters and shoals around inlets and disturbed areas as well as 
    in undisturbed, more isolated deeper areas of the lagoon. Common 
    factors in its distribution appear to be its ability to grow in 
    association with other species and its ability to survive in shallow 
    intertidal flats environments typical of the flood tide deltas near 
    inlets. Johnson's seagrass may extend the coverage of seagrasses within 
    lagoons in some of the zones where other grasses do not grow.
        Dr. Bird questions the ability of H. johnsonii to withstand nearby 
    dredging activities because the sediments of the Indian River contain a 
    good deal of highly organic particulate materials. When resuspended by 
    dredging activities or other physical disturbances, the fine 
    particulate material can attenuate light (reducing Photosynthetically 
    Active Radiation (PAR)) and be a limiting factor in photosynthesis and 
    subsequent seagrass growth and maintenance.
        Several scientists working in the area and for the state of Florida 
    stated that it is clear that direct removal of existing seagrass 
    through new construction will be detrimental to the survival of 
    Johnson's seagrass. There have been no reports of healthy populations 
    outside the presently known range. The survival of the species likely 
    depends on maintaining existing viable populations, especially in areas 
    where large patches are found.
        Issue 5: Some commenters said that seagrasses have overwhelming 
    importance to the ecology and economy of South Florida. Seagrasses are 
    high primary producers within their ecosystem. They provide valuable 
    habitat as nurseries, provide refuge for fisheries, and recycle 
    nutrients throughout their ecosystems. Seagrasses are also a food 
    source for endangered green turtles and the Florida manatee. When 
    seagrass beds disappear, fishery productivity also decreases. They 
    noted that declines in seagrass beds have been documented worldwide, 
    particularly in the Indian River Lagoon, the primary habitat of H. 
    johnsonii.
        NMFS Response: NMFS agrees that seagrasses play an important role 
    in their ecosystems and provide valuable habitat. The vulnerability of 
    seagrasses in general and H. johnsonii in particular, provides the 
    impetus for this listing.
         Issue 6: Some commenters said that the species should be listed as 
    endangered rather than threatened, and that NMFS underestimated the 
    effects of climate change and increasing development and population 
    growth in Florida.
        NMFS Response: NMFS believes that only limited information exists 
    regarding Johnson's seagrass, reproductive capacity, life history 
    characteristics (growth rates, environmental requirements), and the 
    effects of human disturbance which would be necessary in determining 
    that Johnson's seagrass is in danger of extinction throughout all or a 
    significant portion of its range. The protection afforded by listing as 
    threatened will result in the subsequent development of a recovery plan 
    for H. johnsonii. The recovery plan will address the gaps in our 
    knowledge of the biology and ecology of Johnson's seagrass, and such 
    knowledge will, in turn, lead to a better understanding of the 
    demography and population biology of this species.
        Dr. Bird states that although the evidence points to a valid 
    species with a limited distribution, the questions of its degree of 
    extinction is more difficult to resolve. Halophila species as a whole 
    appear to be patchy with few species developing extensive stands. 
    However, he agrees with NMFS' conclusions that human activities in the 
    area could impact the species. Existing criteria and standards, as well 
    as enforcement measures, are inadequate to protect seagrasses.
         Issue 7: Several commenters expressed concern about whether 
    maintenance dredging of existing inlets and channels would be allowed 
    to continue if Johnson's seagrass is listed.
        NMFS Response: NMFS is concerned about the possibility of losing 
    patches of Johnson's seagrass that may be essential to the genetic 
    viability of the species. However, NMFS expects that maintenance 
    dredging activities will be authorized with the oversight provided by 
    section 7 of the ESA.
        Issue 8: Several commenters were concerned that the listing of 
    Johnson's seagrass would prevent or severely curtail expansion or 
    development of ports and maintenance of existing ports, channels and 
    inlets. In turn, this would adversely affect the economy in their 
    communities.
        NMFS Response: The ESA mandates that listing determinations be made 
    solely on the basis of the best scientific and commercial data 
    available after conducting a review of the status of the species and 
    taking into account those conservation efforts being made by any state. 
    However, section 7 of the ESA provides a mechanism for actions 
    requiring Federal funding permits or participation to be conducted in a 
    manner that prevents jeopardy to any species. Therefore, NMFS 
    anticipates that most marine related activities can continue when 
    measures are taken through the section 7 consultation process with 
    Federal agencies to reduce adverse impacts and avoid jeopardizing the 
    continued existence of the species.
        Issue 9: Some commenters stated that any threats to the habitat 
    could be corrected or were being corrected without the species being 
    listed. For example, problems due to prop scarring could be resolved by 
    marking navigation channels and establishing speed zones. Several 
    counties are installing storm water management systems to improve
    
    [[Page 49039]]
    
    water quality. Maintenance dredging is regulated by the state, and 
    spoil is now deposited on beaches to protect shorelines rather than on 
    spoil islands.
         NMFS Response: Other embayments in the distributional range of 
    Johnson's seagrass have marked navigational channels, but seagrass bed 
    scarring still occurs. ``Many of the sea-grass beds in the Indian River 
    Lagoon have prop scars resulting from boaters attempting to cross 
    shallow waters and running aground'' (Indian River Lagoon Comprehensive 
    Conservation and Management Plan, May 1996). Erosion caused by damage 
    from boat wakes may also result in turbidity and siltation, which 
    adversely affect seagrass.
         Issue 10: One commenter wrote that the updated information 
    provided by NMFS reveals that the species is doing well, and shows no 
    signs of decrease in health or population. The commenter also wrote 
    that its geographic range was, if anything, larger than what was 
    reported in 1993.
         NMFS Response: In order to update the original status report 
    (Kenworthy, 1993) and to include information from new field and 
    laboratory research on species distribution, ecology, use, genetics and 
    phylogeny, NMFS convened a workshop on the biology, distribution, and 
    abundance of H. johnsonii. The results of this workshop, held in St. 
    Petersburg, Florida, in November 1996, have been summarized in the 
    workshop proceedings (Kenworthy, 1997) submitted to NMFS on October 15, 
    1997. The new information confirmed NMFS' original determination that 
    the species should be listed as threatened. This final rule is based on 
    updated information.
        Issue 11: Some commenters noted that in the proposed rule, NMFS 
    stated that there is no evidence that the overutilization for 
    commercial, recreational, scientific or educational purpose contributed 
    to the decline of Johnson's seagrass. If this listing factor has not 
    contributed to the decline, they questioned what more needs to be done 
    to protect the species.
         NMFS Response: This factor refers to the actual use of the species 
    itself. For example, if a plant were harvested commercially for food, 
    medicines, or other products, this use might have contributed to the 
    decline of the organism. Johnson's seagrass habitat may be affected by 
    other resource harvesting activities in the ecosystem, but the species 
    itself is not used for commercial, recreational, or educational 
    activities.
        Issue 12: Several commenters stated that there are adequate Federal 
    and State laws to protect all seagrasses which make the additional 
    protection afforded by the ESA unnecessary.
        NMFS Response: While it is clear that the intent of Federal and 
    Florida state laws is to conserve and protect seagrass habitat, it is 
    also clear that there is continued and well-documented loss of seagrass 
    habitat in the United States and elsewhere. For example, seagrasses 
    have declined in many areas of the Indian River Lagoon (Virnstein and 
    Morris, 1996).
        Previous transplantation efforts to mitigate for the loss of 
    seagrass beds have failed. Until recently, Halophila species have not 
    been transplanted successfully in the field and studies underway are 
    incomplete (Kenworthy-personal communication). Many seagrass ecosystems 
    are known to recover very slowly even under the most natural, pristine 
    conditions. Current efforts are insufficient to protect critical 
    seagrasses. This was also the conclusion and recommendation of 
    scientists attending the International Seagrass Workshop in Kominato, 
    Japan in August 1993.
        NMFS believes that Johnson's seagrass needs the additional 
    protection of listing, including consideration of effects of Federal 
    actions on the species through the section 7 consultation process of 
    the ESA. During consultation with other Federal agencies, NMFS can 
    ensure that any federally funded, permitted, or authorized activity 
    includes adequate measures to reduce adverse impacts from these 
    activities and to prevent jeopardizing the continued existence of the 
    species.
         Issue 13: One commenter wrote that NMFS had exceeded the time 
    limit for making a final determination after proposing to list 
    Johnson's seagrass as threatened in 1993.
         NMFS Response: In 1989, NMFS was notified by the FWS that it had 
    received information indicating that H. johnsonii was a rare species 
    which may need to be listed under the ESA. By 1993, NMFS had gathered 
    enough information to propose listing the species as threatened. In 
    1994, NMFS proposed critical habitat for the species. A joint public 
    hearing was held on both the proposed listing and proposed critical 
    habitat. The proposed critical habitat designation was very 
    controversial. Because of the controversy and new NMFS/FWS polices on 
    listing, NMFS postponed the final listing decision until information 
    used to make the original proposal had been peer reviewed and 
    additional information gathered. Peer review of the original 
    information and the results of new studies confirmed NMFS' original 
    determination that the species should be listed as threatened. The new 
    information was reviewed at a technical workshop in November 1996, and 
    summarized in a report in October 1997. In addition to gathering new 
    information, the final listing was delayed by the year-long 
    Congressionally imposed moratorium on listing species in fiscal year 
    1996.
    
    Summary of the Factors Affecting the Species
    
        After a thorough review and consideration of all information 
    available, NMFS concludes that H. johnsonii warrants listing as a 
    threatened species. Procedures found at section 4(a)(1) of the ESA (16 
    U.S.C. 1531 et seq.) and regulations (50 CFR part 424) promulgated to 
    implement the listing provisions of the ESA were followed. A species 
    may be determined to be endangered or threatened due to one or more of 
    the five factors described in section 4(a)(1). These factors and their 
    application to H. johnsonii are as follows:
        1. Present or Threatened Destruction, Modification or Curtailment 
    of its Habitat or Range.
        Habitat within the limited range in which H. johnsonii exists is at 
    risk of destruction by a number of human and natural perturbations 
    including (1) dredging; (2) prop scoring; (3) storm surge; (4) altered 
    water quality; and (5) siltation. Due to the fragile nature of H. 
    johnsonii's shallow root system, the plants are vulnerable to human-
    induced disturbances in addition to the major natural disturbances to 
    the sediment, and their potential for recovery may be limited. 
    Destruction of benthic communities due to boating activities (propeller 
    scarring and anchor mooring) was observed at all H. johnsonii sites 
    during the NMFS study. Further, this condition is expected to worsen 
    with the predicted increase in boating activity. This severely disrupts 
    the benthic habitat by breaching root systems and severing rhizomes, 
    and significantly reducing the viability of the community.
        Turbidity is a critical factor in the distribution and survival of 
    seagrasses, especially in deeper regions of the lagoon, where reduced 
    PAR limits photosynthesis. Shallow regions are less affected by 
    turbidity unless light is rapidly attenuated. In interior lagoonal 
    areas where salinity is low, highly colored water typically is 
    discharged via drainage systems. Stained waters attenuate shorter 
    wavelengths rapidly, removing important PAR as well as potentially 
    stressing plants due to the low salinity. This is a critical factor, 
    especially in the vicinity of Sebastian,
    
    [[Page 49040]]
    
    St. Lucie, Jupiter, and Ft. Pierce Inlets, and Lake Worth and North 
    Biscayne Bay where freshwater reaches the flood tide delta and nearby 
    seagrass meadows via rivers and canal systems that discharge into the 
    lagoon.
        Trampling due to human disturbance and increased land-use induced 
    siltation can threaten viability of the species. Degradation of water 
    quality due to human impact is also a threat to the welfare of seagrass 
    communities. Nutrient over-enrichment caused by inorganic and organic 
    nitrogen and phosphorous loading via urban and agricultural land run-
    off can stimulate increased algal growth that may smother the 
    understory of H. johnsonii, shade rooted vegetation, and diminish the 
    oxygen content of the water. Such low oxygen conditions have a 
    demonstrated severe negative impact on seagrasses and associated 
    communities. Continued and increased degradation of environmental 
    quality also will have a detrimental effect upon H. johnsonii 
    communities.
        2. Overutilization for Commercial, Recreational, Scientific or 
    Educational Purposes.
        Overutilization for these purposes has not been a documented factor 
    in the decline of this species.
        3. Disease or Predation
        There are two known herbivores that occur in the range of H. 
    johnsonii--the green sea turtle (Chelonia mydas), and the West Indian 
    manatee (Trichechus manatus), both of which feed upon the seagrass. 
    Herbivorous fish also feed upon the seagrass community. Predation 
    pressures alone are not likely to be a threat to the species existence.
        4. The Inadequacy of Existing Regulatory Mechanisms.
        Despite existing Federal and Florida state laws to conserve and 
    protect seagrass habitat, there is a continued and well-documented loss 
    of seagrass habitat in the United States and elsewhere. For example, 
    seagrasses have declined in many areas of the Indian River Lagoon 
    (Virnstein and Morris, 1996). The Florida Department of Natural 
    Resources and the Florida Department of Environmental Regulation have 
    recently merged, greatly increasing the assignment of enforcement 
    responsibilities without an associated increase in staff for the Marine 
    Patrol. Although stormwater management systems are installed or being 
    installed, the Florida Indian River Lagoon Act of 1990 does not cover 
    other large inputs that will affect water quality, which in turn could 
    affect seagrasses (e.g. industrial discharges, brine disposal, canals, 
    processing plants).
        Previous transplantation efforts to mitigate for the loss of 
    seagrass beds have failed. Until recently, Halophila species have not 
    been transplanted successfully in the field and studies underway are 
    incomplete (Kenworthy-personal communication). Many seagrass ecosystems 
    are known to recover very slowly even under the most natural, pristine 
    conditions. Current efforts are insufficient to protect critical 
    seagrasses. This was also the conclusion and recommendation of 
    scientists attending the International Seagrass Workshop in Kominato, 
    Japan in August 1993.
        5. Other Natural or Human-made Factors Affecting Its Continued 
    Existence.
        The existence of the species in a very limited range increases the 
    potential for extinction from stochastic events. Natural disasters such 
    as hurricanes could easily diminish entire populations and a 
    significant percentage of the species. Seagrass beds that are in 
    proximity to inlets are especially vulnerable to storm surge from 
    hurricanes and severe storm events.
    
    Efforts Being Made To Protect Johnson's Seagrass
    
        Section 4(b)(1) of the ESA requires the Secretary of Commerce 
    (Secretary) to make listing determinations solely on the basis of the 
    best scientific and commercial data available and after taking into 
    account state efforts being made to protect the species. Therefore, in 
    making its listing determinations, NMFS assesses the status of the 
    species, identifies factors that have led to the decline of the 
    species, and assesses available conservation measures to determine 
    whether such measures ameliorate risks to the species.
        There is a continued and well-documented loss of seagrass habitat 
    notwithstanding existing Federal and state laws to conserve and protect 
    this habitat. Previous transplantation efforts to mitigate for the loss 
    of seagrass beds have failed. NMFS has determined that these existing 
    conservation efforts are not sufficient to prevent a listing 
    determination. NMFS will, however, consider state conservation efforts 
    when developing protective regulations under section 4(d) of the ESA. 
    State conservation efforts may also serve as a basis for a cooperative 
    agreement under section 6 of the ESA.
    
    Listing Determination
    
        Based on available information, NMFS concludes that Johnson's 
    seagrass warrants listing as a threatened species. This species is 
    rare, has a limited reproductive capacity, and is vulnerable to a 
    number of anthropogenic or natural disturbances. Also, it exhibits one 
    of the most limited distributions of any seagrass. Within its limited 
    range (lagoons on the east coast of Florida from Sebastian Inlet to 
    central Biscayne Bay), it is one of the least abundant species. Because 
    of its limited reproductive capacity and limited energy storage 
    capacity, it is less likely to survive environmental perturbations and 
    to be able to repopulate an area when lost. Finally, habitat loss has 
    continued despite existing Federal and state conservation efforts.
    
    Conservation Measures
    
        Conservation measures provided to species listed as endangered or 
    threatened under the ESA include recognition, recovery action, 
    requirements for Federal protection, and prohibitions against certain 
    activities. Recognition through listing encourages and results in 
    conservation actions by Federal, State, and local agencies, private 
    organizations, and individuals. The ESA provides for cooperation with 
    states and requires that recovery actions be carried out for all listed 
    species. The protection required of Federal agencies and the 
    prohibitions against certain activities involving listed plants are 
    discussed, in part, here.
        Section 9 of the ESA prohibits certain activities that directly or 
    indirectly affect endangered species. These prohibitions apply to all 
    individuals, organizations, and agencies subject to U.S. jurisdiction. 
    Section 9 prohibitions apply automatically to endangered species; as 
    described below, this is not the case for threatened species.
        Section 4(d) of the ESA directs the Secretary to implement 
    regulations ``to provide for the conservation of [threatened] species'' 
    that may include extending any or all of the prohibitions of section 9 
    to threatened species. Section 9(a)(2)(E) also prohibits violations of 
    protective regulations for threatened species of plants implemented 
    under section 4(d). While NMFS proposed extending the section 9 
    prohibitions to Johnson's seagrass, it is not including that proposal 
    in this final rule. Rather, NMFS will issue protective regulations 
    pursuant to section 4(d) for Johnson's seagrass in a separate proposed 
    rulemaking.
        Section 7 (a)(4) of the ESA requires Federal agencies to consult 
    with NMFS on any action that is likely to jeopardize the continued 
    existence of a species proposed for listing or result in destruction or 
    adverse modification of proposed critical habitat. For listed species, 
    section 7 (a)(2) requires Federal agencies to ensure that activities 
    they
    
    [[Page 49041]]
    
    authorize, fund, or carry out are not likely to jeopardize the 
    continued existence of such a species or to destroy or adversely modify 
    its critical habitat. If a Federal action may affect a listed species 
    or its critical habitat, the responsible Federal agency must enter into 
    formal consultation with NMFS.
        Federal agency actions or programs that may affect populations of 
    Johnson's seagrass and its habitat include U.S. Army Corps of Engineers 
    authorization of projects affecting waters of the U.S. under section 
    404 of the Clean Water Act and Section 10 of the Rivers and Harbors Act 
    (i.e., beach nourishment, dredging, and related activities including 
    the construction of docks and marinas); Environmental Protection Agency 
    authorization of pollutant discharges and management of freshwater 
    discharges into waterways; U.S. Coast Guard regulation of vessel 
    traffic; management of national refuges and protected species by the 
    FWS; management of vessel traffic and other activities by the U.S. 
    Navy; authorization of state coastal zone management plans by NOAA's 
    National Ocean Service, and management of commercial fishing and 
    protected species by NMFS.
        Listing H. johnsonii as threatened provides for the development of 
    a recovery plan for the taxon. The recovery plan would establish a 
    framework for State and Federal agencies to coordinate activities and 
    to cooperate with each other in conservation efforts. The plan would 
    set recovery priorities and describe site-specific management actions 
    necessary to achieve the conservation of Johnson's seagrass.
    
    Critical Habitat
    
        Section 4(b)(6)(C) of the ESA requires that, to the extent prudent, 
    critical habitat be designated concurrently with the listing of a 
    species unless such critical habitat is not determinable at that time. 
    As stated previously, NMFS proposed a designation of critical habitat 
    on August 4, 1994 (59 FR 39716). Given the passage of time since that 
    proposal, NMFS will address the designation of critical habitat in a 
    separate Federal Register notice and additional comments will be 
    solicited at that time.
    
    References
    
        A complete list of all references cited herein is available upon 
    request (see ADDRESSES).
    
    Classification
    
        The 1982 Amendments to the ESA, in section 4(b)(1)(A), restrict the 
    information that must be considered when assessing species for listing. 
    Based on this limitation of criteria for a listing decision and the 
    opinion in Pacific Legal Foundation v. Andrus, 657 F.2d 829 (6th Cir. 
    1981), NMFS has categorically excluded all ESA listing actions from 
    environmental assessment requirements of the National Environmental 
    Policy Act (NEPA) under NOAA Administrative Order 216-6.
        As noted in the Conference report on the 1982 amendments to the 
    ESA, economic impacts cannot be considered when assessing the status of 
    the species. Therefore, the economic analysis requirements of the 
    Regulatory Flexibility Act (RFA) are not applicable to the listing 
    process. In addition, this final rule is exempt from review under E.O. 
    12866.
        At this time NMFS is not issuing protective regulations under 
    section 4(d) of the ESA. In the future, prior to finalizing its 4(d) 
    regulations for this species, NMFS will comply with all relevant NEPA 
    and RFA requirements.
        This final rule does not contain a collection-of-information 
    requirement subject to the Paperwork Reduction Act.
    
    List of Subjects in 50 CFR Part 227
    
         Endangered and threatened species, Exports, Imports, Marine 
    Mammals, Transportation.
    
        Dated: August 27, 1998.
    Hilda Diaz-Soltero,
    Acting Assistant Administrator for Fisheries, National Marine Fisheries 
    Service.
        For the reasons set forth in the preamble, 50 CFR part 227 is 
    amended as follows:
    
    PART 227---THREATENED SPECIES
    
        1. The authority citation for part 227 reads as follows:
    
        Authority: 16 U.S.C. 1531-1543; subpart B, 227.12 also issued 
    under 16 U.S.C., 1361 et seq.
    
        2. The heading for part 227 is revised to read as set forth above.
        3. Section 227.4 is amended by adding paragraph (p) to read as 
    follows:
    
    
    Sec. 227.4  Enumeration of threatened species.
    
    * * * * *
        (p) Johnson's seagrass (Halophila johnsonii)
    [FR Doc. 98-24357 Filed 9-11-98; 8:45 am]
    BILLING CODE 3510-22-F
    
    
    

Document Information

Effective Date:
10/14/1998
Published:
09/14/1998
Department:
National Oceanic and Atmospheric Administration
Entry Type:
Rule
Action:
Final rule.
Document Number:
98-24357
Dates:
Effective October 14, 1998.
Pages:
49035-49041 (7 pages)
Docket Numbers:
Docket No. 980811214-8214-01, I.D. 052493B
PDF File:
98-24357.pdf
CFR: (1)
50 CFR 227.4